 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009105772.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
MYB_related |
Protein Properties |
Length: 196aa MW: 21976.8 Da PI: 9.7764 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009105772.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 36 | 79 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+++++Ed+l+++++++lG++ W++Ia +++ gRt+ +++ +w +yl
XP_009105772.1 36 NFSKDEDDLILKLHALLGNR-WSLIAGRLP-GRTDDEVRIHWESYL 79
89******************.*********.***********9996 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009651 | Biological Process | response to salt stress |
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0010023 | Biological Process | proanthocyanidin biosynthetic process |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MNKISHGALS RPSGMLHRAK RYRGRKYAKP ELKESNFSKD EDDLILKLHA LLGNRWSLIA 60 GRLPGRTDDE VRIHWESYLE KKLMKMGIDP TNHRIYHHTN YTSRRFINAS YKKHETDIIS 120 DQSSSVSESC DMKLLPVSST NCSEANASSG NSRLPDLNIG LVPIKTVTSL PVGSLQEPSG 180 SSNHGSTSQE TLLLFQ
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN379103 | 0.0 | JN379103.1 Brassica rapa subsp. oleifera myb-like transcription factor 2 (MYBL2-1) mRNA, complete cds. |