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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009105107.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
ARR-B |
Protein Properties |
Length: 537aa MW: 60421.7 Da PI: 5.3621 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009105107.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 82 | 6.6e-26 | 216 | 270 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ eLH++Fv+av+q+G +kA Pk+il+lm+++ Lt+e+v+SHLQkYRl
XP_009105107.1 216 KARVVWSYELHQKFVNAVNQIGCDHKAGPKKILDLMNIPWLTRENVASHLQKYRL 270
68****************************************************8 PP
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2 | Response_reg | 55.6 | 3e-19 | 64 | 146 | 26 | 107 |
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
v+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el
XP_009105107.1 64 VTTCGLAREALRLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEL-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 146
67788899******999999**********************5543.7*******************************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 537 aa
Download sequence Send
to blast |
MEKGFSPVGL RVLVVDDDPT WLKILEKMLK KCSYEGSLLL FLCFYTLGVH LLNFLCFCFN 60 PVAVTTCGLA REALRLLRER KDGFDIVISD VNMPDMDGFK LLEHVGLELD LPVIMMSVDG 120 ETSRVMKGVQ HGACDYLLKP IRMKELKIIW QHVLRKKLQE VRDIEGCCYD GGADWFTQGQ 180 FLGGGEDVSF GKKRKDFDFE KKLFQDESDQ SSSSKKARVV WSYELHQKFV NAVNQIGCDH 240 KAGPKKILDL MNIPWLTREN VASHLQKYRL YLSRLEKGKE IKCYSGGVKN MDSPPKDAEI 300 NSGHQSPGKS SSYAFLKATE TDPKQLASAS VSDPTSDIHM PQKAKKTRIG FDPPISSGVF 360 GSLLPWNDVP DPLESKPPIL YENSFLQQQP LPSQSSYVAN SAPSLMQEEM KPSYVNPDEF 420 LMPQNKNSTV ILQDMDLSAP FSSNATSNTE SIPGSLNWEL PEAHHSGSLD TDLDFTWLHG 480 EHFFANSGLQ NFQFQDYSNS SSTSLLSELP PHLWYGNDRL PDPDEYTLMV DQGLFIS
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Detected in the whole plant. Predominantly expressed in roots and stems. {ECO:0000269|PubMed:15173562}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250, ECO:0000269|PubMed:12610214}. |