 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009104712.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
ZF-HD |
| Protein Properties |
Length: 294aa MW: 32476 Da PI: 8.6761 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009104712.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 103.4 | 1.4e-32 | 64 | 118 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
+vrY+eClkNhAas+Gg ++DGCgEfmps geegt +al+CaAC+CHRnFHR+e++
XP_009104712.1 64 TVRYRECLKNHAASVGGSVYDGCGEFMPS-GEEGTLEALRCAACDCHRNFHRKEND 118
79**************************9.999********************976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MDMRSHEMIE RRRDDNGNNG VGNINSIITN EDNCNGNNNT RVSSNSQTLV PHQSKSSPSF 60
SISTVRYREC LKNHAASVGG SVYDGCGEFM PSGEEGTLEA LRCAACDCHR NFHRKENDGV 120
GSSDGSSHHR HHHHHHQYGG GRRPPPRNMM LNPLMLPPPP SYAPLHHHKY GMSPPGGGGM 180
VTPMSFPYGG GGGGAESSSE DLNMYGQSSG ENGGGVTPGQ TAFSMKRFRT KFTAEQKEKM 240
MEFAEKLGWR MNKQDEEDLK RFCGEIGVKR QVFKVWMHNN KNNARKQPTP TTTT
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC025814 | 1e-172 | AC025814.7 Arabidopsis thaliana chromosome 1 BAC F22H5 genomic sequence, complete sequence. |
| GenBank | AK229038 | 1e-172 | AK229038.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-33-K14. |
| GenBank | AY084462 | 1e-172 | AY084462.1 Arabidopsis thaliana clone 10873 mRNA, complete sequence. |
| GenBank | BT028894 | 1e-172 | BT028894.1 Arabidopsis thaliana unknown protein (At1g75240) mRNA, complete cds. |
| GenBank | CP002684 | 1e-172 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
