 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008244210.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 431aa MW: 48369.4 Da PI: 5.7502 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008244210.1 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.3 | 6.7e-14 | 218 | 269 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+
XP_008244210.1 218 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 269
79****************************...9******************995 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MERLQGPIDP CFFGEHLDFQ CLEQGLSTTE SLRFEEEEEA AHLSIPSLED KMPFLQMLQT 60 VNSPPPYFPL KEPSFQALLR LQHLKNPWEL GKAYMPEMET QLQTALEIES CVTHDMVELH 120 SPVKSEAKDL HNHPHSVSAG NLEAVSSDCI QDQEQPNSAE INCRRKGNNS SGSPPPTWAQ 180 AQNEPEQTQY PKSPPVTRER RKRKRTRPTK NKEEVESQRM THIAVERNRR RQMNDHLNVL 240 RSLMPTSYIQ RGDQASIVGG AIDFVKELEQ LLQSLEAQKR MRRADQGSNG DNSFSSSSSS 300 SSASMAMPSN GMFMSLSQCR IGSHEEGTTT TPLEDEVTAQ NKSEAADIDV TVIQTHVNLK 360 IQCQRRAGQL MKAILALEDL RLAVLHLNIT SSQDTVLYSF NLKIEEGCKL GSADEIARAV 420 HQIFSFINGC S
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 199 | 204 | RRKRKR |
2 | 218 | 229 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP689430 | 0.0 | KP689430.1 Prunus pseudocerasus isolate Unigene20562 bHLH transcription factor mRNA, complete cds. |