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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_008238754.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 484aa MW: 54407.1 Da PI: 7.565 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008238754.1 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.5 | 1.8e-11 | 309 | 355 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+
XP_008238754.1 309 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 355
699***********************6.....5*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FRVNSDLASK RNNKVTNNHQ PKFGFNKKVT SIEAEEALLD EDMVDLEMRL VDHGDVTGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFVSDNDNNN RVSQQNGSRK GNVLAPLLEN 240 RIFSGSQKKL TRQAAGTKEA APFNIGGSSP ESLSGSVGNF TCENTENTRS KKRSRSSNNG 300 ASRESSLLNH VEAERQRREK LNHRFYLLRS VVPNVSKMDR SSLLADAVAY INQLKAKVEE 360 LELKTQAQPQ NPQRVSVNNL DNQCSQSTNS IVDHHSSYNN TKVVPVEVDV KIMGSEAIIR 420 VQCPDQDYPY ARLMNALKGL GLQVYHASIS SVKELMIQDV VARMPYGFTS EEAMRIGIIK 480 RWHN
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 5e-23 | 15 | 212 | 3 | 192 | Transcription factor MYC3 |
4rqw_B | 5e-23 | 15 | 212 | 3 | 192 | Transcription factor MYC3 |
4rs9_A | 5e-23 | 15 | 212 | 3 | 192 | Transcription factor MYC3 |
4yz6_A | 5e-23 | 15 | 212 | 3 | 192 | Transcription factor MYC3 |
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