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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008237244.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GATA |
Protein Properties |
Length: 295aa MW: 31443 Da PI: 5.4412 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008237244.1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 48.9 | 9e-16 | 203 | 239 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+
XP_008237244.1 203 CMHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 239
99***99889************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MSESNHQNSM YGSGGGAPQS NQVEEQEDDV EESIDNPHIR FEDSSAIPPN PLYLTSSEYP 60 PPAATNGGSD QLTLSFQGEV YVFDEVSPDK VQAVLLLLGG YEIPSGIPSM GPVPLNQQGM 120 NDLPVKPIQP QRAASLSRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKASSDD 180 GGPASSGATQ GSGQDESMQE TSCMHCGISS KSTPMMRRGP AGPRTLCNAC GLKWANKGVL 240 TGGPKVSNIG MQDPSAKGIE QGNGEAKDSV AITMGANIAP SSNGDNSAMT VDRNL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |