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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_008236411.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
Dof |
| Protein Properties |
Length: 400aa MW: 41887.7 Da PI: 8.7327 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_008236411.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.8 | 1.4e-39 | 53 | 113 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e++lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++
XP_008236411.1 53 PEQSLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 113
68999*****************************************************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010052 | Biological Process | guard cell differentiation |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MMSSDNTPPG KPPPGTKGGE SLAAGGGGGG GASSRAKPTS SSSSGAKQQH PPPEQSLKCP 60
RCDSPNTKFC YYNNYSLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK RVRSSSSNSR 120
LSCSLDSKDS AGSSSSENMM LGGLKFFHGI SPAMDFQLGG LSSLPSRLHH NPSSGISYNN 180
NNNQFSAFGD VSGTSGLTIS TPLDTSASCN SFLGFNYPLT LGGGGGGGAG GGGDGFSATQ 240
NMMSSMNVHS SLASSIESLS SINQDLHWKL QQQRLAMLFG SGNDHDQSTQ TTQSQLEQQQ 300
KTQQIAPISL FQNLEVSSKA DHQHQHQVVG THGRREGASA SGDTATEWFF GNSYAPPVTP 360
TPTNSGGGNG GGGGNENTSN WQHGIQAWSS HDLQQYNALP
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC133003 | 5e-36 | AC133003.3 Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence. |
| GenBank | AP014959 | 5e-36 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012611 | 5e-36 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
