PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008235334.2
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 493aa    MW: 54411.6 Da    PI: 6.0288
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008235334.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.87.4e-16239295359
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                     ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L  e ++L k+l   ++++++ 
  XP_008235334.2 239 DVKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSTLLKRLTDVNQKYDNA 295
                     68********************************************99999998865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.9E-11236292No hitNo description
SMARTSM003382.5E-18237301IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.047239293IPR004827Basic-leucine zipper domain
PfamPF001702.7E-13240293IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10240292No hitNo description
PROSITE patternPS000360244259IPR004827Basic-leucine zipper domain
PfamPF124984.7E-28308430IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MHSVFSVDDV SDTAWALSSP AMNRSASEWA FEQFLDEFST PAATPRRSVA VADQLTASSV  60
ASCSVASQSS TSKREDGDEE VVEIKKPDHH NHHHQPQQQL NLPNPPPLDP TSTVQVNSDQ  120
YREFLKNQLD LACAAVALSR ASSLKPVDLD NMAAESQSQL SKPSQLAHSQ SLDKDAGHGF  180
PVQQNEADTG PVGIPALPAV QKITGLQSKQ TTSGSSKEDS DDDDLEGDIE INENMDPSDV  240
KRARRMLSNR ESARRSRRRK QAQMSELETQ VGQLRVEHST LLKRLTDVNQ KYDNAAVDNR  300
ILRADIETLR AKVKMAEDSV KRVTGINPLL LAMSNLPSVS IPSVNPMDGS TNAAVPMQPN  360
SNQLFQPVVP NLATSTLPHQ RLDTGFPRDP PISLVRNPQS NVGQPTITGS NMAEISSIQH  420
TASVDHMQQN RSSSSFGQEW VHVNHCRVGI LIFPMLSQRT RNRAECSDFF IPSYFTERDR  480
RLVELMFTFT SVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253260RRSRRRKQ
2255260SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008235334.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235334.20.0PREDICTED: LOW QUALITY PROTEIN: light-inducible protein CPRF2
TrEMBLM5VVS70.0M5VVS7_PRUPE; Uncharacterized protein
STRINGXP_008235334.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.16e-51basic leucine zipper 25