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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_008233111.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
Dof |
| Protein Properties |
Length: 278aa MW: 30432.5 Da PI: 8.0838 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_008233111.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.9 | 1.3e-39 | 38 | 98 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+
XP_008233111.1 38 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 98
6899******************************************************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009639 | Biological Process | response to red or far red light |
| GO:0009845 | Biological Process | seed germination |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MDTAQWPQES GELDKPMEDH EMGSNACPRS ALEKRARPQE QLNCPRCNST NTKFCYYNNY 60
SLTQPRYFCK TCRRYWTEGG TLRNVPVGGG SRKNKKSTSS SASSSASLLS KNNIPDLNPP 120
SSLSHFSAHQ NPRSTHEGQD LNLAFNAMEH YQQNPAAGAS TSSSAPLSAM ELLRTGIASR 180
GVNSFIPTQN MADHSNTLYA SSPGFSLQEF KPNLGFCVDG LGNRYGDHEI NGGRLLFPFG 240
DLKQISSSTA HHELDHHQNK GQGNPTGYWN GLLGGGSW
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT136873 | 2e-50 | BT136873.1 Lotus japonicus clone JCVI-FLLj-14C11 unknown mRNA. |
| GenBank | BT144333 | 2e-50 | BT144333.1 Lotus japonicus clone JCVI-FLLj-13E12 unknown mRNA. |
