PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008232902.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family BES1
Protein Properties Length: 702aa    MW: 78306.3 Da    PI: 5.8761
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008232902.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822144.21.2e-44802172136
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpleeaeaagssasaspess 93 
                     g +r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +g +p   ++aa+ss+ +sp+++
  XP_008232902.1  80 GVRRCRPIEEKERTKLRERQRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPaksQGPRPAGVNSAAVSSQMVSPQTP 174
                     6789999*************************************************************963344444488889999999****** PP

          DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasaasl 136
                      +++ ++s  +s  e  ++ +k + +ps+s +d  s+a ++++
  XP_008232902.1 175 ASLKGVTSGYRSSGELNACNMKGVFIPSSSPYDLPSSARSQNS 217
                     **9999***************************9988765544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-3882213IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene3DG3DSA:3.20.20.808.0E-198259695IPR013781Glycoside hydrolase, catalytic domain
SuperFamilySSF514453.52E-179261694IPR017853Glycoside hydrolase superfamily
PfamPF013731.5E-103266682IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69297311IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69318336IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69340361IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060344352IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008422.7E-6423432IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007505.6E-69433455IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69506525IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69540556IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69557568IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.6E-69575598IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.7E-6578588IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007505.6E-69615637IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.7E-6666680IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008422.7E-6681695IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    Send to blast
MATDIQKLIG TSEEDEDEEM EMDVKEEGDD DDEEDGEKHV DATSMIAGVD GGMPTRSSNN  60
NRFQQHHQIQ EQVGTPGGGG VRRCRPIEEK ERTKLRERQR RAITARILAG LRRHGNYNLR  120
VRADINDVIA ALAREAGWVV LPDGTTFPAK SQGPRPAGVN SAAVSSQMVS PQTPASLKGV  180
TSGYRSSGEL NACNMKGVFI PSSSPYDLPS SARSQNSSVV GDGGGPTDSH PLIGGSMDNV  240
GDKQIVDIPL KLPERDYSNT SCIPVYVMLP LGVINMKCEM VDPDGLLKQL RILKSVNVDG  300
VMVDCWWGIV EGHAPGEYNW NGYKRLFQMV CELKLKLQVV MSFHECGGNV GDDVCIPLPH  360
WVAEIGRSNP DIFFTDREGR RNPECLSWGI DKERVLRGRT AVEVYFDCMR SFRVEFDEYF  420
KNGNISMIQV GLGPCGELRY PSCPVKHGWR YPGIGEFQCY DLYLLKSLRK AAEARGHSFW  480
GRGPDNAGSY NSRPHETGFF CDGGDYDSYY GRFFLNWYSR VLVDHGDRVL SLAKLAFDGT  540
CIAAKLSGLH WWYKTASHAA ELTAGFYNPC NRDGYAAIVT MLKKHEATLN LACTELHMLD  600
QHEDFQEALG DSEGLFWQVL NAAWDVCVPV SSENALPCHD HVSYKKILDS AKPLTDPDGR  660
HLSSFTYLRL SPLLMERHSF MEFERFIKRM HGEAVGLQVY SN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wds_A1e-14526369312444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008232902.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008232902.10.0PREDICTED: beta-amylase 7
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLM5X5T90.0M5X5T9_PRUPE; Beta-amylase
STRINGXP_008232902.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]