PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008229046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 155aa MW: 17729.3 Da PI: 7.8371 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.5 | 2.1e-22 | 10 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP..wdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkdkev 92 +G+rF+P + el+ +yL +kv+g +l+ +++ e+d+y e ++L +++e+++yfF++ +kk+ +g+r +r+ + g W+++ ++ XP_008229046.1 10 LVGCRFEPYEAELLAHYLYNKVNGLPLSS-NAVIECDLYGEEEiwRKLF--DETGETSLYFFTELKKKTGKGSRVERMSSGGCvtWRNQSNKVIC 101 68************************999.778899**98864213443..34578899******************888775569988775444 PP NAM 93 lsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++ ++g k+++ + +++++ k +Wvmhe+ l XP_008229046.1 102 VNDnepNKIVIGYKRMFSYVPKKTSTIAKGEWVMHEFWL 140 4436667777**********99***************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.26E-23 | 4 | 143 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.305 | 9 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-14 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
METTRSLGLL VGCRFEPYEA ELLAHYLYNK VNGLPLSSNA VIECDLYGEE EIWRKLFDET 60 GETSLYFFTE LKKKTGKGSR VERMSSGGCV TWRNQSNKVI CVNDNEPNKI VIGYKRMFSY 120 VPKKTSTIAK GEWVMHEFWL AGCLVNNNNQ PSLIN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008229046.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008229046.1 | 1e-113 | PREDICTED: NAC domain-containing protein 79-like | ||||
TrEMBL | A0A314YZH4 | 9e-88 | A0A314YZH4_PRUYE; NAC domain-containing protein 79-like | ||||
STRING | XP_008229046.1 | 1e-112 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17637 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 3e-15 | NAC domain containing protein 47 |