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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008226305.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NAC |
Protein Properties |
Length: 237aa MW: 27511.7 Da PI: 6.5836 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008226305.2 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 78.1 | 1.9e-24 | 7 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyWka 85
+p+G++F+P++eel +yL ++++g++ ++ v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+Wk
XP_008226305.2 7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPE-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWKG 98
599************************999.99*******9879****7423322..24355688******************643344999*** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k++ + g+++g++k + + + +p+ +W+mhe++l
XP_008226305.2 99 EDSGKKIRA-CGSNIGIRKRFRYMNPGSPH--DDRWIMHEFQL 138
********9.999***********655555..89*******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPEGVVP DCDLYGTKEP WEIWRDFHHS 60 SPDDQEDIYV FTTLKKKTPN GSRFCRTVGA AGTGVWKGED SGKKIRACGS NIGIRKRFRY 120 MNPGSPHDDR WIMHEFQLDE SLLRVRNKET IVLCLVRKKE TPGKRKFEEL QNHEDVPPRG 180 EIQAQHVHDD QQHHIGPSTY DELRVLDLMN YVEGEDNMVN PTLXCTVRSA GASWHKY
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 8e-17 | 7 | 165 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-17 | 7 | 165 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-17 | 7 | 165 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-17 | 7 | 165 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 9e-17 | 7 | 165 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 8e-17 | 7 | 165 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 8e-17 | 7 | 165 | 17 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT893414 | 1e-173 | KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds. |