PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221713.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 286aa    MW: 30893.3 Da    PI: 6.3696
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221713.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.8e-11170217455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_008221713.1 170 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 217
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.25E-10164221No hitNo description
SuperFamilySSF474596.8E-18164235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828166216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-18166235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-8170217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MDPPTLVNEC SFSNANATSF NLSEIWQFPM SGGGASGGDS GGGGALGLRR PNFAQSFAQF  60
GDVSGAIRDV LACSDPNPMS LDVRGSHGGG AARKRLDAED ESPKSSGHIG GSDCDGKRLK  120
TARSRDETSE SKAEAETSSG KPVEQTTQPP DPPKQDYIHV RARRGQATDS HSLAERARRE  180
KISERMKILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV EFLSMKLETV NTRMNPGIEV  240
FPSKDFGQQT FDTAAMAFGT QPPREYSRGS SPEWLHMQVG GGFERT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221713.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221713.10.0PREDICTED: transcription factor bHLH79
SwissprotQ69WS31e-79BH094_ORYSJ; Transcription factor BHLH094
TrEMBLM5XSK20.0M5XSK2_PRUPE; Uncharacterized protein
STRINGXP_008221713.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-88BIG PETAL P