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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_004516708.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
WRKY |
Protein Properties |
Length: 390aa MW: 44335.8 Da PI: 5.605 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004516708.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.2 | 1.9e-29 | 235 | 294 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
+D ++WrKYGqK++kgs++prsYYrC+sa +C +kk ve+s+++++++ +tY+geHnhek
XP_004516708.1 235 EDPWAWRKYGQKPIKGSPYPRSYYRCSSArECGAKKLVEKSHTNENTFLVTYTGEHNHEK 294
899************************999****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MDTDDCDLLA IVRSCKATTI TNHTTVFETP TPTNNTIFPQ NPTPYFEDFT FTQGNSSTPC 60 VPLKPNDFIE LEKLKIIPTP TTIPTPITIT NNNSVYDTNQ NSTFYNFPTL MEQQQMQLNL 120 NQYELDLTEQ TKLSYYDEPR FEFPSVESPI FNFEHASNRV NCITITTDHF DLAYNHPSLQ 180 LQPHQELNQL PIQEPQTNSM VLANANPQPN KQRSRKRKNQ PLKMICEMNA QKLLEDPWAW 240 RKYGQKPIKG SPYPRSYYRC SSARECGAKK LVEKSHTNEN TFLVTYTGEH NHEKPINRIM 300 VSTPSWNKPP ETRLLPAGVV GPSQNIVSPN AMLWFDQPES GNSPIHGGNA QVNNDDNIVL 360 VPNMMAVSET SLMNFNPLNI GNIPFVESNP
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1wj2_A | 2e-17 | 233 | 295 | 16 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 2e-17 | 233 | 295 | 16 | 77 | Probable WRKY transcription factor 4 |