 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004516674.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
LBD |
| Protein Properties |
Length: 263aa MW: 29278.7 Da PI: 8.4075 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004516674.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.3 | 3.7e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+C++C+vlr++C++dC+++p++ p++q++++ +++k++G++ +++l+++ p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+
XP_004516674.1 4 SCNGCRVLRKGCSEDCIIRPCLewikcPQSQANATVFLAKFYGRAGLINLINSGPQNLRPAIFRSLLYEACGRIANPIYGSVGFLWSGSWQLCQA 98
6********************************************************************************************** PP
DUF260 91 kaelallke 99
+++ +l +e
XP_004516674.1 99 AVDSVLKGE 107
*99887766 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSEDCI IRPCLEWIKC PQSQANATVF LAKFYGRAGL INLINSGPQN 60
LRPAIFRSLL YEACGRIANP IYGSVGFLWS GSWQLCQAAV DSVLKGEPIK PITSEAAANE 120
RAPPLMAYDI RHVAKDDNLK ETQQAKTRSR FKRTMKPKAS KKTGSGLVEE KNESESLLSY 180
HCKDNESGVS VETSILFHNE PESKPKMSDR ADENVTDEVG LELRLGIEPV SREEHVVPIK 240
KRKIELKDWG VSCKVELGLE LVA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC147741 | 1e-66 | AC147741.12 Medicago truncatula clone mth2-17b23, complete sequence. |
