PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004516444.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family FAR1
Protein Properties Length: 294aa    MW: 33417.5 Da    PI: 5.7213
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004516444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.18.9e-1641126190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY+eYA++ GF  ++++s+k  ++ge     + Cs++g++ ++ +    + +t +++  +C ak+++k++kdg w++tk+e  H+He +
  XP_004516444.1  41 SFYEEYASRKGFGWKIRSSRKG-QDGEPCYLILSCSRKGSKVSKISC---TLKTLPTKVNNCPAKIVIKLDKDGLWYITKFEPGHTHETS 126
                     5****************99998.8888999**********9998877...8899999999***************************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.8E-1341126IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MDCGTIEDEG IRVDNLDDDD NACCWEPATG MCFSCLEEVK SFYEEYASRK GFGWKIRSSR  60
KGQDGEPCYL ILSCSRKGSK VSKISCTLKT LPTKVNNCPA KIVIKLDKDG LWYITKFEPG  120
HTHETSPTKA RLFKANKKMN LHVKRTIQIN DDAGVRINKT FQSLVKDAGG HENVPFCERD  180
VRNYVNKERR AIGKEGDGKA LISYFCQIRE QNSDFFYDID LDDDFHVRNV FWADARSRAA  240
YEYFGDVENN TEIVRNHNES NICIESSIEA IESNTLVGGN TSFLDLLSQF STTM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004516444.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004516444.10.0protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A1S2Z7J10.0A0A1S2Z7J1_CICAR; protein FAR-RED IMPAIRED RESPONSE 1-like
STRINGXP_004516444.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.18e-28FAR1 family protein