PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515795.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 171aa    MW: 19064.2 Da    PI: 4.8178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.51.6e-131360355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+r  ++ g+Wv eIr+p++   + r++lg+f t+e+Aa+a++ a ++l+g
  XP_004515795.1 13 YHGIR--SRGGKWVTEIREPRK---TNRIWLGTFSTPEMAAAAYDVATLALKG 60
                    88995..779*********854...49*******************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.4E-221274IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-161269IPR016177DNA-binding domain
PROSITE profilePS5103218.5311268IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-251269IPR001471AP2/ERF domain
CDDcd000182.30E-221370No hitNo description
PfamPF008471.7E-71360IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MSSSSSSKRH PTYHGIRSRG GKWVTEIREP RKTNRIWLGT FSTPEMAAAA YDVATLALKG  60
GEAILNFPDL ARRYPVPASN SAEDIRSAAT SAAELMTGGS TFNEPYNNAF YDAPHSYNYE  120
SEFIDEEAIF SMPRLLVDMA EGMLLSPPRM NLPPSDYSTE YQTFGESLWN F
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515795.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515795.11e-124ethylene-responsive transcription factor ERF026-like
SwissprotQ9FJ902e-44ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A1S2Z6751e-122A0A1S2Z675_CICAR; ethylene-responsive transcription factor ERF026-like
STRINGXP_004515795.11e-123(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-46ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]