![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_004515653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 356aa MW: 40261.8 Da PI: 6.6109 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.7e-11 | 63 | 93 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 ++k+ rr+++NReAAr+sR+RKka++++Le+ XP_004515653.1 63 DSKVLRRLAQNREAARKSRLRKKAYVQQLET 93 6899*************************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.0E-8 | 57 | 98 | No hit | No description |
SMART | SM00338 | 1.5E-6 | 61 | 121 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.565 | 63 | 98 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-8 | 64 | 93 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.2E-7 | 65 | 97 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 68 | 83 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.8E-27 | 153 | 226 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 356 aa Download sequence Send to blast |
MDIYEPFQQV SMWGDSFKVE GGLNSIASPM LLVNTSMENK SEFIPHEPRD SSGADQETTN 60 KDDSKVLRRL AQNREAARKS RLRKKAYVQQ LETSRLKLMQ LEIEIGRARK QGMYTGNALD 120 TSFMGSSETI NPGVVAFEIE YGNWVEEQHR WNEELRNAFQ TNASEVQLHL VVQSVLNHYS 180 DLFRMKADAA KADVLYLISG VWKTSLERLF LWIGGSRPSQ LLNLILPQLE PLTDQQIASI 240 NKLRLSSQQA EDALSQGLDK LQQSLVQDMA VDPLTAANHG FQMAIALEKF EGLEGFVSQA 300 DHLRQQTLIH MSRILSTHQA ARGLLALGEY FHRLRTLCSL WTSRPCDSIM SPKITP |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. {ECO:0000269|PubMed:12897257}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_004515653.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004515653.1 | 0.0 | transcription factor TGA3-like isoform X2 | ||||
Swissprot | Q39234 | 1e-130 | TGA3_ARATH; Transcription factor TGA3 | ||||
TrEMBL | A0A1S2Z5X0 | 0.0 | A0A1S2Z5X0_CICAR; transcription factor TGA3-like isoform X2 | ||||
STRING | XP_004515651.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22070.1 | 1e-123 | TGA1A-related gene 3 |