PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004514774.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family AP2
Protein Properties Length: 405aa    MW: 45631.8 Da    PI: 9.3787
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004514774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.3e-1573132155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV++++++gr++A+++d  ++n    k+ k+++lg +  +e Aa+a++ a++k++g
  XP_004514774.1  73 SRFRGVSRHRWTGRYEAHLWDkGTWNPtqkKKgKQVYLGAYNDEEAAARAYDLAALKYWG 132
                     789******************888855566447*************************98 PP
2AP256.37.7e-18175226155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg++gt eeAa+a++ a+ +++g
  XP_004514774.1 175 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGTQEEAARAYDIAAIEYRG 226
                     89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-1173132IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-1673142IPR016177DNA-binding domain
SMARTSM003804.0E-2574146IPR001471AP2/ERF domain
PROSITE profilePS5103219.5274140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-1574141IPR001471AP2/ERF domain
PRINTSPR003673.0E-57586IPR001471AP2/ERF domain
PfamPF008472.8E-13175226IPR001471AP2/ERF domain
CDDcd000182.09E-25175236No hitNo description
SuperFamilySSF541718.5E-18175236IPR016177DNA-binding domain
SMARTSM003801.4E-25176240IPR001471AP2/ERF domain
PROSITE profilePS5103218.742176234IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-17176235IPR001471AP2/ERF domain
PRINTSPR003673.0E-5216236IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MELALVKSEL SPRSNRLLVL DADSIQTTKS VKRRRRDSSI AVLGGIEQGN LTEEQQPLSG  60
NVSTAATTVK RSSRFRGVSR HRWTGRYEAH LWDKGTWNPT QKKKGKQVYL GAYNDEEAAA  120
RAYDLAALKY WGTSTFTNFP VSDYDKEIEI MITMTKEEYL ASLRRRSSGF SRGVSKYRGV  180
ARHHHNGRWE ARIGRVFGNK YLYLGTYGTQ EEAARAYDIA AIEYRGINAV TNFDLSTYIR  240
WLRPGAHSTT SQEHQKPSTD PQPFAASNSI QTRANIEISN SNINPFHASE VENTKKQDFC  300
KSMTPLSPCN KPSSPTALGL LLKSSVFREL MQRNLNSSNE DDEEVELKYP QEGIGGFFDI  360
DNSNTYLCSS NINRLPNLES SEERSLPMYH GTVQSLWNGA SNISN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198106PTQKKKGKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004514774.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0931680.0BT093168.1 Soybean clone JCVI-FLGm-24O15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004514774.10.0AP2-like ethylene-responsive transcription factor AIL7
TrEMBLA0A1S2Z4780.0A0A1S2Z478_CICAR; AP2-like ethylene-responsive transcription factor AIL7
STRINGXP_004514774.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.26e-65AP2 family protein