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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004513583.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
B3 |
Protein Properties |
Length: 322aa MW: 37072.9 Da PI: 8.0167 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004513583.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 103.2 | 1.5e-32 | 69 | 173 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
f+k ltpsdv+k++rlv+pk++ae++ ++ + ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F++++ ++
XP_004513583.1 69 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgggDSGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDS 163
99****************************87444457889************************************************887799 PP
E..EEEEE-S CS
B3 90 felvvkvfrk 99
++l++ ++r+
XP_004513583.1 164 QRLFINWRRR 173
99*****997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MDLQGTTLWW TQNQPQQTML LVEPIHHPQP QWFNSQTYPN TPHFNTNEEN EDKDNTAIKL 60 IEDEKEPMFE KPLTPSDVGK LNRLVIPKQH AEKYFPLGGG DSGECKGLLL SFEDESGKCW 120 RFRYSYWNSS QSYVLTKGWS RYVKDKRLDA GDVVLFERHR VDSQRLFINW RRRKLNGNET 180 AQVSRGKVSD GNGKNEVAVG WSRGFYPAHP YPAHHLLPYQ HDHCLHAGRG SPQGQNQRTK 240 PVGNNSSSSS SSPRELRLFG VTMVCQPEHD STPQCSSYDS NNMPSTQGTD HTQHLYHYHQ 300 PSSHNSNSNS HSHVVRHQPY YY
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 7e-49 | 64 | 173 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 7e-49 | 64 | 173 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC218728 | 1e-48 | KC218728.1 Vicia faba clone NAC-VF-156 microsatellite sequence. |