 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_004512963.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
Family |
Trihelix |
Protein Properties |
Length: 384aa MW: 44673.6 Da PI: 4.2736 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004512963.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 43.2 | 1.1e-13 | 136 | 223 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
+W ++ + +L+e+ e+ +l+r++l+ W ev++k+ +e ++er+ qC++ ++++++rykk+k ++ + ss ++p+f++++
XP_004512963.1 136 EWNEHGTFVLLEIWGEKFLQLGRNSLRSEEWHEVAEKVsEELKVERNVSQCRSVLDKVKRRYKKEKSRMDEMgLGVSSCKWPFFKKMD 223
5*************************************8889*************************9999856778889*******8 PP
|
Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 1.3E-17 | 135 | 225 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MDDMEDDARY PSKGYPLRRK NPNLRQKHPI RTLQYHHPPT LRYNDPDHNN NNIEEDYEDE 60 EPEEFDDYNV DEEDEDGIEN GYIGNFDENE GFIRKKRKIR SGSGSSSVSN YDLMPRGKFS 120 YVNRGSGGGS SSVSEEWNEH GTFVLLEIWG EKFLQLGRNS LRSEEWHEVA EKVSEELKVE 180 RNVSQCRSVL DKVKRRYKKE KSRMDEMGLG VSSCKWPFFK KMDMLMSSSA RQEYGLACGV 240 DSGEFVFMNT RVYLNRSNGF DEMRDSPGES ETSEDDEDDD EDDDFDGVRG GGGDEEEDEV 300 DKEEEEASYR VLADSIQKFG KIYEKIENTK RQQMMELEKM RMDFNRELEL QKKQILERTQ 360 AEISKMQEVG DDDDTDTSAD NLSE
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC202341 | 1e-130 | AC202341.28 Medicago truncatula clone mth2-24i7, complete sequence. |