PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512772.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NF-X1
Protein Properties Length: 1109aa    MW: 120288 Da    PI: 7.9927
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X121.84.2e-07297315119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H+C++ CH GpC+pC+
  XP_004512772.1 297 CGRHRCEQACHVGPCDPCQ 315
                     ******************6 PP
2zf-NF-X122.13.2e-07419437119
        zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                     CG+H C+ +CH G+CppC+
  XP_004512772.1 419 CGIHACKDPCHVGECPPCK 437
                     ******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578503.53E-7120190No hitNo description
PROSITE profilePS500168.52127188IPR019787Zinc finger, PHD-finger
PROSITE profilePS500899.391130186IPR001841Zinc finger, RING-type
PROSITE patternPS013590130185IPR019786Zinc finger, PHD-type, conserved site
CDDcd060083.86E-5219280No hitNo description
SMARTSM004380.05242260IPR000967Zinc finger, NF-X1-type
PfamPF014223.7244259IPR000967Zinc finger, NF-X1-type
CDDcd060084.54E-10287335No hitNo description
PfamPF014221.1E-5297314IPR000967Zinc finger, NF-X1-type
SMARTSM004385.2E-4297316IPR000967Zinc finger, NF-X1-type
CDDcd060083.28E-8351396No hitNo description
PfamPF014220.0015361378IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0018361380IPR000967Zinc finger, NF-X1-type
CDDcd060084.53E-12409457No hitNo description
PfamPF014222.4E-5419437IPR000967Zinc finger, NF-X1-type
SMARTSM004381.1E-4419438IPR000967Zinc finger, NF-X1-type
PfamPF014220.9477488IPR000967Zinc finger, NF-X1-type
SMARTSM0043894477508IPR000967Zinc finger, NF-X1-type
CDDcd060083.04E-8506558No hitNo description
PfamPF014229.2E-4516533IPR000967Zinc finger, NF-X1-type
SMARTSM004380.001516535IPR000967Zinc finger, NF-X1-type
CDDcd060082.44E-5563611No hitNo description
PfamPF0142235573590IPR000967Zinc finger, NF-X1-type
SMARTSM004380.11573591IPR000967Zinc finger, NF-X1-type
PfamPF014220.15626641IPR000967Zinc finger, NF-X1-type
SMARTSM004388.1626656IPR000967Zinc finger, NF-X1-type
SMARTSM0043821665686IPR000967Zinc finger, NF-X1-type
PfamPF014242.1E-5795860IPR001374R3H domain
Gene3DG3DSA:3.30.70.3307.5E-6898953IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1109 aa     Download sequence    Send to blast
MSLQQRRERR EGSRFPSQRA PRQEWVPKGA GASNTASTTA TTTTVVQASG SNSHQKNAKD  60
NADAGCSSNQ GVVVAPPFAR HRSNHVAHRV EKERDNGRNG NMVGRGSRDS SLPQLVQEIQ  120
EKLMKGAVEC MICYDMVRRS APVWSCSSCY SIFHLNCIKK WARAPTSVDL SAEKNLGFNW  180
RCPGCQFVQH TSSKDIKYVC FCGKRVDPPS DLYLTPHSCG EPCGKPLERE VLVTGGRKDD  240
LCPHACVLQC HPGPCPPCKA FAPPRLCPCG KKKIATRCSD RQSDLTCGQQ CDRLLECGRH  300
RCEQACHVGP CDPCQVLINA SCFCCKMTQV IFCGEMAVKG ELKEESGLFS CGSKCGKELG  360
CGNHICSEVC HPGSCGECEF LPSRVKTCCC GKTRLEEERH SCMDPIPTCS QVCGKLLHCG  420
IHACKDPCHV GECPPCKVLI SQKCRCSSTS RTVECYKTLT ENQKFTCEKP CGQKKNCGRH  480
RCSEKCCPLS GPNNDVTIAD WDPHFCSMLC GKKLRCGQHV CETLCHSGHC PPCLETIFTD  540
LTCACGRTSI PPPLPCGTMP PSCQLPCSVP QPCGHSGSHS CHFGDCPPCS VPVSKECIGG  600
HVVLRNIPCG SKYIRCNNPC GRTRQCGLHA CGRTCHAPPC DILPGFVKDF RATCGQTCGA  660
PRRSCRHMCM AQCHPSCSCP DVRCEFPVTI TCSCGRISAN VPCDAGGSNS NYNADAIYEA  720
SIIQKLPVPL QPVDANGQKV PLGQRKLMCD DECAKLERKR VLADAFDITP SLDALHFGEN  780
SSFELLSDTF RRDPKWVLAV EERCKILVLG KNKGATHSLK VHVFCPMIKD KRDAVRLIAE  840
RWKLSVVSAG WEPKRFIVIS ATQKSKAPAR VLGVKGTTTI NAPLPTAFDP LVDMDPRLVV  900
SFPDLPRDAD ISALVLRFGG ECELVWLNDK NALAVFHDPA RAATAMRRLD HGTVYQGAVS  960
FVQNVGTSAT SSVTNAWGGG VGATKESGGL STLKNNPWKK AVVLDPGWKE DCWGDEQWAT  1020
PGGSANIQPS VLKKETPIPA SLNPWNILNQ ESSSTSSTTV IKSEASWKDV KSNAVSTSAE  1080
PCAGGSNGGN MDATEEASEV AEDWEKAFE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004512772.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512772.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A1S2Z0B80.0A0A1S2Z0B8_CICAR; NF-X1-type zinc finger protein NFXL1
STRINGXP_004512772.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1