PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512346.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family BES1
Protein Properties Length: 650aa    MW: 73714.1 Da    PI: 5.9497
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822152.43.4e-47451941145
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     +g+g+k+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+v++DGttyr ++ p   a+ +gs+a +s+es+l+
  XP_004512346.1  45 TGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVDADGTTYR-QCPP---ASNMGSFAARSVESQLS 135
                     589*******************************************************************.3444...5899************* PP

          DUF822  96 .sslkssalaspvesysa.spksssfpspssldsislasa.......asllpvlsvlsl 145
                       sl++++++  +e++ + +++ ++ +sp+s+ds+ +a+        as++p+ sv++l
  XP_004512346.1 136 gGSLRTCSVQETLENQPPvVLRIDECLSPASIDSVVIAERdskngkyASVSPINSVDCL 194
                     99999999888887776516799**************9888888888778888877775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.4E-4846194IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.16E-156212646IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.5E-168215645IPR013781Glycoside hydrolase, catalytic domain
PfamPF013731.0E-84237617IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56252266IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56273291IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56295316IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56388410IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56461480IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56495511IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56512523IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56530553IPR001554Glycoside hydrolase, family 14
PRINTSPR007509.8E-56568590IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    Send to blast
MKSINEDASV LNLDPQSDHS SDYLAQPQPR RPRGFAAAAM GTNSTGKGKK EREKEKERTK  60
LRERHRRAIT SRMLAGLRQY GNFPLPARAD MNDVLAALAR EAGWIVDADG TTYRQCPPAS  120
NMGSFAARSV ESQLSGGSLR TCSVQETLEN QPPVVLRIDE CLSPASIDSV VIAERDSKNG  180
KYASVSPINS VDCLEADQLM QDIHSGVHES DFNCTPYVPV YIKLPAGIIN KFCQLIDPEG  240
IRQELIHIKS LNIDGVVVDC WWGIVEGWSP QKYVWSGYRE LFNIIREFKL NLQVVMAFHE  300
CGGNDSSDAL ISLPQWVLDI GKENQDIFFT DREGRRNTEC LSWGIDKERV LKGRTGIEVY  360
FDMMRSFRTE FDDLFAEGLI YAVEIGLGAS GELKYPSFSE RMGWRYPGIG EFQCYDKYLQ  420
HSLRRAAKLR GHSFWARGPD NAGHYNSMPH ETGFFCERGD YDNYYGRFFL HWYSQTLTDH  480
ADNVLSLASL AFEETKIIVK VPAVYWWYKS PSHAAELTAG YHNPTNQDGY SPVFEVLRKH  540
AVTMKFVCLG FNLSSQEANE SLVDPEGLSW QALNSAWERG LITAGENALF GYDRERYKRL  600
VEMAKPRNDP DHRHFSFFVY QQPSLLQGNV CLSELDFFIK CMHGEMTGDL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdq_A1e-12721760711401Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004512346.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512346.10.0beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A1S2YZF60.0A0A1S2YZF6_CICAR; Beta-amylase
STRINGXP_004512346.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF119023032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]