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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004512229.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
WOX |
Protein Properties |
Length: 302aa MW: 33888.1 Da PI: 6.6025 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004512229.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 62 | 8.8e-20 | 28 | 89 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++
XP_004512229.1 28 STRWTPTTDQIRILKDLYYNngIRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 89
58*****************8567*************************************97 PP
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2 | Wus_type_Homeobox | 113.5 | 1.1e-36 | 27 | 91 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
XP_004512229.1 27 SSTRWTPTTDQIRILKDLYYnNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 91
789***************9779*****************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MEQQQQQTGN EEGGGSSGKG GYMSRQSSTR WTPTTDQIRI LKDLYYNNGI RSPSAEQIQR 60 ISARLRQYGK IEGKNVFYWF QNHKARERQK KRFTSDHNNN NNNNNLPMQR SATITNNVAV 120 AAWKQIEEQQ SPIIQHKYSN NIISSTGLSS ASCSSAEMVT VGQIGNYGYG SVPMEKSFRE 180 CTISAGCSSG HVGSTINHHL GWVGHVGPYS STYANLFEKI RPEEEIMEEE QEEENGSPEI 240 ETLPLFPMHG EDIHGYCNLK SNSSNYGAPS WYQAEDGFIN ASRTTSLELS LNSYTRRSPD 300 YA
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ477681 | 1e-128 | FJ477681.1 Medicago truncatula WUSCHEL (WUS) mRNA, complete cds. |