PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_004511808.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 164aa MW: 19136.8 Da PI: 10.47

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004511808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.8e-10	68	126	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK+ +e+L++ ++ +N++Lk l+ l + +l++e+ XP_004511808.1 68 RKRKRMISNRESARRSRMRKQRHLENLRNQLNLFKVKNRELKTGLQFLLCHLNRLRTEN 126 6789**************************************98887766666666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.7E-11	64	128	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.5E-8	65	123	No hit	No description
PROSITE profile	PS50217	10.277	66	129	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-8	67	126	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.03E-9	68	116	No hit	No description
CDD	cd14702	1.04E-14	69	120	No hit	No description
PROSITE pattern	PS00036	0	71	86	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MLSTLSASNF TALDVDLTPW DFDDVLSAFE IPTSPKLTSS SGSGEPNEIR LEVEKPGFDD 60 SNRNMEERKR KRMISNRESA RRSRMRKQRH LENLRNQLNL FKVKNRELKT GLQFLLCHLN 120 RLRTENEWLR SERTVLRQKL SNISQILVFQ PFSTAWPCNI ATAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004511808.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004511808.2	1e-116	bZIP transcription factor RISBZ3-like
TrEMBL	A0A1S2YY64	1e-115	A0A1S2YY64_CICAR; bZIP transcription factor RISBZ3-like
STRING	XP_004511808.1	1e-116	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5435	32	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	9e-32	basic leucine-zipper 5