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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004510942.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
LBD |
Protein Properties |
Length: 230aa MW: 24204.2 Da PI: 8.1475 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004510942.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 129.8 | 1.2e-40 | 24 | 124 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C aCk+lrrkC ++C++apyf +eq +++fa+vhk+FGasnv+kll+++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael
XP_004510942.1 24 PCGACKFLRRKCLSGCIFAPYFDSEQgASHFAAVHKVFGASNVSKLLQNVPVHKRLDAVITICYEAQARMRDPVYGCVAHIFTLQQQVVSLQAEL 118
7***********************9989******************************************************************* PP
DUF260 95 allkee 100
++l+ +
XP_004510942.1 119 SYLQGH 124
*99865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010089 | Biological Process | xylem development |
GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
Sequence ? help Back to Top |
Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MSINSSCSGS GGGCGGGNSG ACGPCGACKF LRRKCLSGCI FAPYFDSEQG ASHFAAVHKV 60 FGASNVSKLL QNVPVHKRLD AVITICYEAQ ARMRDPVYGC VAHIFTLQQQ VVSLQAELSY 120 LQGHIATYEV PQPPKTSPPQ ATIAPSMVSL ANLPLASSSS INPATYDLSS LFDPMAQTSS 180 WAMHQRPNGQ YFGSGTSTSN NSGGDLQSLA RELLLRYGSS NDPSSNSLSK
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the positive regulation of tracheary element (TE) differentiation. Involved in a positive feedback loop that maintains or promotes NAC030/VND7 expression that regulates TE differentiation-related genes. {ECO:0000269|PubMed:19088331}. |