PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510876.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ARR-B
Protein Properties Length: 424aa    MW: 47866.2 Da    PI: 4.6364
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like59.29e-19202253255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +r+ Wt +LH++F+eave   G++ A Pk+i +lm+v+gLt e v   LQkYR 
  XP_004510876.1 202 KRRTWTDDLHRKFLEAVEIA-GIN-ARPKKIFQLMDVEGLTKESVSNYLQKYRQ 253
                     799***************98.776.9***************************6 PP
2Response_reg49.91.7e-17231301107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT.HHHHHHHHHT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge.eedalealka 92 
                     vl+vd + + r ++ ++l + gy ev +a+ ++eal ++++k+  ++l+l+  ++p+m+ ++l++++re + ++p  ++t++++  + + +al+ 
  XP_004510876.1  23 VLVVDANSACRAIVSKMLLSIGY-EVMTATLASEALSIIRDKKneVNLVLVEAQLPDMEIYDLTEKMREIS-DVPSFIITSYDDdIPSISRALST 115
                     89*********************.***************877778************************99.7777777766655********** PP

                     TESEEEESS--HHHH CS
    Response_reg  93 GakdflsKpfdpeel 107
                     Gak +  Kp++ ++l
  XP_004510876.1 116 GAKLCYRKPVKFSDL 130
                     *********999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23005.1E-2120139No hitNo description
SuperFamilySSF521721.57E-2020138IPR011006CheY-like superfamily
SMARTSM004481.1E-621134IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011025.72722138IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.1E-1223131IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.00E-1424137No hitNo description
PROSITE profilePS512949.967198256IPR017930Myb domain
SuperFamilySSF466891.03E-13199256IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-19199255IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-15202253IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MESYEFQSAE LRTYEGPVAG VKVLVVDANS ACRAIVSKML LSIGYEVMTA TLASEALSII  60
RDKKNEVNLV LVEAQLPDME IYDLTEKMRE ISDVPSFIIT SYDDDIPSIS RALSTGAKLC  120
YRKPVKFSDL QGLWRFAVWN RYEPIFMEEV PGFWWYSSEV TMANNGLECR SSMHIGESSL  180
HNANCKEQEF LDKDNSALSK RKRRTWTDDL HRKFLEAVEI AGINARPKKI FQLMDVEGLT  240
KESVSNYLQK YRQSMKLRAN AMEQHMNGYV SLTKNSRGKR PLFSEQQGVT DNPAISPKDL  300
SNCMHVQVLD TSAYFSSLES SSSQEPPFGQ NPPCLSLEKL GQELDLSTLL AFDTRENFFP  360
SLPIALLPPL NEKDIEIYGG EGKIYEIFYA KGAQQFTDED LNMWLSTIPD NLNNDANAEA  420
VADA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510876.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510876.10.0two-component response regulator ARR14 isoform X2
TrEMBLA0A1S2YW610.0A0A1S2YW61_CICAR; two-component response regulator ARR14 isoform X2
STRINGXP_004510871.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-30response regulator 2