PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004510866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 318aa MW: 34681 Da PI: 8.2208 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.4e-20 | 26 | 76 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d s ++ r +lg+++t+eeAa+a+++a+++l+ge XP_004510866.1 26 RFIGVRQRP-SGRWVAEIKDSS---QHVRLWLGTYDTPEEAARAYDEAARALRGE 76 578******.7*********42...35**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.97E-32 | 26 | 85 | No hit | No description |
SMART | SM00380 | 2.8E-34 | 26 | 89 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.363 | 26 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.2E-28 | 26 | 84 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.8E-15 | 26 | 76 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.88E-20 | 27 | 85 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.3E-7 | 27 | 38 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-7 | 49 | 65 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence Send to blast |
MSGAEAAKYA SATNNITKSN KPNMRRFIGV RQRPSGRWVA EIKDSSQHVR LWLGTYDTPE 60 EAARAYDEAA RALRGENART NFAASVSINQ NTGKSDQGLI SSPNELRNSL SFASLKAKLS 120 KNLQSIMARG SDHNNINKSS KSRVSDHFTF ASIFNRRSTN YHQISALDMK NIEKVVQPSI 180 IVPPNDGDHH PNHNHNYPSS VSDCSSEWFG FQNHGLDSDG SDIVENINNI NNNAVSVGDQ 240 GFLDQLMGWI DDSSDICASD IQGSSSKRFK VSSSVLVPPT FSGSSPYDCG SPFSGYASPY 300 NSCGSPCNGH ASPYYGRK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-15 | 26 | 82 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004510866.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004510866.1 | 0.0 | ethylene-responsive transcription factor ERF012-like | ||||
TrEMBL | A0A1S2YW45 | 0.0 | A0A1S2YW45_CICAR; ethylene-responsive transcription factor ERF012-like | ||||
STRING | XP_004510866.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8324 | 31 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-16 | related to AP2 11 |