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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004510665.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
bHLH |
Protein Properties |
Length: 620aa MW: 69076.5 Da PI: 6.4649 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004510665.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.4 | 5.1e-13 | 462 | 508 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
XP_004510665.1 462 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 508
799***********************66......******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 620 aa
Download sequence Send
to blast |
MKIEVGLGVG GLWNEEEKAM VVEVLGVNAL NYLISNSVSN ENLLMAIGSG ENLQNKLSDL 60 VERPNVLNFS WNYAIFWQIS QSKFGDWVLG WGDGCCREPK EQEQEKQEED LRMKGVYVED 120 EKKQRMRKRV LQKLHTTFGG SDEDNYAFGL DRVTDTEMFF LASMYFSFPR GHGGPGKSFA 180 TGKHLWLIDA LKSDYDDDDY CVRSFLAKSA GFKTIVLVPT DLGVVELGSV RNVCESFELL 240 QTVKSVFSSQ SSFPRVKSIS LSMDDEKRDE NAPFSCLAVG ESIKTNVNNV NHNHHLNNHS 300 RVEGVGVPKI FGQELNSATA TPSREKLAVR KMEERPWGGH PNGNGVSFPN GVNGSSWRAS 360 QVVRQHAPVD VFAPRMSPST SNAPEVGNDV RHEFVLNNYQ QQRQAQMQID FSGATSRPSV 420 RSIVGESELS DIDREEKPSP SDERRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA 480 LRAVVPNISK MDKASLLGDA IAYINELQAK LVTMESERAQ FGSTSRDGSS SVLQANPRAP 540 DVDIQAAQDG VIVKVSCAID AHPISKLIQT FKDAEISIVE SKLNTASDTV FHTFIIKSQG 600 SEQLTKEKLI AAFSRESNSL
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_B | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_E | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_F | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_G | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_I | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_M | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
5gnj_N | 7e-32 | 456 | 521 | 2 | 67 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 443 | 451 | RRPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |