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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004510630.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
HD-ZIP |
Protein Properties |
Length: 280aa MW: 32605.2 Da PI: 5.1691 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004510630.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.2 | 1.4e-18 | 73 | 124 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+f++eq++ Le++Fe + + +++ +LA++lgL rqV +WFqN+Ra++k
XP_004510630.1 73 KRFSDEQIKSLESMFETETRLEPRKKLQLARELGLHPRQVAIWFQNKRARWK 124
68*************************************************9 PP
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2 | HD-ZIP_I/II | 113.6 | 1.2e-36 | 72 | 162 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+r+s+eq+k+LE++Fe+e++Lep++K +lareLgl+prqva+WFqn+RAR+k+kqlE++y++L+++y++l+++ e+++ke ++L +l++
XP_004510630.1 72 TKRFSDEQIKSLESMFETETRLEPRKKLQLARELGLHPRQVAIWFQNKRARWKSKQLEREYNKLQTSYNNLASRFESMKKERQTLLIQLQK 162
69***********************************************************************************999886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MFLDIKVGID EFNLIDAYIS QDRKIIKVSK FLNPSKKMFE TLEYNSQYTY SSEAGEASPP 60 SSSMRKKKNK NTKRFSDEQI KSLESMFETE TRLEPRKKLQ LARELGLHPR QVAIWFQNKR 120 ARWKSKQLER EYNKLQTSYN NLASRFESMK KERQTLLIQL QKLNDLINKP IEQSHSSSQV 180 KGENSMESES ENGNNIKCET DVKQNHSMER SEHDVLGPLS DDDDTSIKVE YFGLEDEPGL 240 LNFAEHADGS LTSPEDWSAF ESNDLLGQSS SDYQWWDFWS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX508649 | 0.0 | JX508649.1 Medicago sativa homeobox-leucine zipper protein mRNA, complete cds. |