PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510231.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 510aa    MW: 56735.1 Da    PI: 6.2059
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.3e-09319366455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_004510231.1 319 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 366
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.71E-10313370No hitNo description
SuperFamilySSF474596.41E-17313384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663315365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.4E-17315383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-6319366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MENQFFLNAG FEPSMPTWQS LSSAMEIQPT TLLNCSSDQN QDCFFNPNWE KSTDQQNHHF  60
DSSALSSIVS SPISSSPPNE NFMMRELIGK LGTFRNSCDE ISQHFVKENM QNMNSSVDLG  120
FVERAAKFSC FGSKSFNERS NNQFVMKNNN VEFVQRSVKV MENGKILPRV SSSPSLKTLV  180
SQINNIENKN ENGRMEVANS QEESTISEQN TPNGEMGVKV SLDIMNSRKR KASSSKGKAS  240
NSSSPKKGVE GSGEESNAKK SKSNEGERNE NGGMNMEEDS KEGTTNAGEE KQNKSNSKPI  300
EPLKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN  360
YVQSLQRQVE FLSMKLSSVN TRMDLSIESL VSKDVFQSNN SLQNSIFQLD SPAPSFYGQN  420
QAIHNNIPNT TVTHCSVDTL DPSLSQNVGM HLPLLNGFNE AASQYPLTFC EEDLHTIVQM  480
GFGQTSNRNT PIHSPSFNGS NQASQMKIEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510231.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510231.10.0transcription factor bHLH62-like
TrEMBLA0A1S2YUQ40.0A0A1S2YUQ4_CICAR; transcription factor bHLH62-like
STRINGXP_004510231.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-94bHLH family protein