 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004508663.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
TCP |
| Protein Properties |
Length: 353aa MW: 39215.4 Da PI: 8.3578 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004508663.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 85.3 | 1.5e-26 | 52 | 152 | 3 | 66 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................ 65
g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WL+++ + i++l+ +
XP_004508663.1 52 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIEATQSDIDKLPPLdipqcftshfhhhqlpppgtsfslggfydqnn 146
78*************************************************************66665555555554444444444444444444 PP
TCP 66 .....s 66
XP_004508663.1 147 gmaktR 152
333330 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MMIENSSESY EAKQEGGDGI MKSEKLAGAG STSRQWTSLR NPRIVRVSRS LGGKDRHSKV 60
CTIRGLRDRR IRLSVPTAIQ LYDLQDRLGL SQPSKVVDWL IEATQSDIDK LPPLDIPQCF 120
TSHFHHHQLP PPGTSFSLGG FYDQNNGMAK TRYNNWDIDS SVGRLKGKEA ENVCMDSEKS 180
KLWMKSTNEQ FGSNYFSNSS PSVHGLSSYH NLDPSSTLSL SQFGNSGNNI FPYYHQQVES 240
HHNSGTVMQF SSSSFTNGNS QLLFCPSSVS LFSNNNNSLE TTDNHAARQH LHHQILNSSS 300
SSLSSSSSSS HALMMPLIPT LHLPINSPFR RLPLPFSSKL LDSDHDNNNT RNG
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G60970.1 | 2e-46 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |
