PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004507735.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 509aa    MW: 55684.1 Da    PI: 6.7893
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004507735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.74.8e-23198255259
                     --SS-EEEEEEE--TT-S.S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgse.fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+ +  +rsYYrCt+++C++kk +e++++ ++v+e++Y++eH h+
  XP_004507735.1 198 SDGYNWRKYGQKQVKSPTtGSRSYYRCTQSSCCAKK-IECCDHSGHVIETVYKSEHSHD 255
                     7**************975169*************98.*********************7 PP
2WRKY96.32e-30372428359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  XP_004507735.1 372 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHD 428
                     9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-20190257IPR003657WRKY domain
PROSITE profilePS5081116.145192257IPR003657WRKY domain
SuperFamilySSF1182902.75E-18194257IPR003657WRKY domain
SMARTSM007743.1E-21197256IPR003657WRKY domain
PfamPF031064.7E-16199255IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.2E-31355430IPR003657WRKY domain
PROSITE profilePS5081131.846365430IPR003657WRKY domain
SuperFamilySSF1182906.93E-27366430IPR003657WRKY domain
SMARTSM007741.5E-34370429IPR003657WRKY domain
PfamPF031062.1E-23372427IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MTEHRGSEAL PVGPTELLPK ENDSKSYDRN QVEEEEEEEK AEEIEERVGE SPPATESQLG  60
NSNEPNSETL IDFPSSILQN QSFDLKVSPN MLNSDDKVEN KEIVQTPPEK EIMAREAAQT  120
PPTQTENQLQ VIVCATPLSE LSPNSVTKSL SSIPSSTIQI QKMSTPNVSN LPVPEIGKKN  180
PSGGKALSSV SVARTPASDG YNWRKYGQKQ VKSPTTGSRS YYRCTQSSCC AKKIECCDHS  240
GHVIETVYKS EHSHDPPRKT NSIRENKFVS SNEPTTENSA LVKPIKVLKD STPSISSKAQ  300
EEAPCSSDKK PQNSSNINGN GKVSLNEEHL HEPEPKRRKE KGDIIHSDSH VKPEKKPKFV  360
IHAAGDVGIS GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA VDNSDAVIIT  420
YKGVHDHDTP VPKKRHGPPS APLVAAAAPA SMSNLQLTKP GSPQNQKIST QWSVDTEGEL  480
TGEAMDLGGE KAIESARTLL SIGFEIKPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-24358430274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004507735.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004507735.10.0probable WRKY transcription factor 32
SwissprotP595831e-124WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A1S2YP120.0A0A1S2YP12_CICAR; probable WRKY transcription factor 32
STRINGXP_004507735.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-117WRKY DNA-binding protein 32