PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Function |

Cis-element |

Regulation |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

XP_004505530.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

VOZ

Protein Properties

Length: 486aa MW: 54755 Da PI: 5.3532

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004505530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	423.2	4e-130	243	459	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaf gpkcalwdc+rpaqg e +qdycss+h+ la neglpg+tp+lrp gid+kdg+lfaa+ ak+qgkevgip+cegaa++k+pwna+e+ XP_004505530.1 243 PPPSAFRGPKCALWDCFRPAQGLEGCQDYCSSCHELLANNEGLPGMTPILRPYGIDVKDGPLFAAVLAKTQGKEVGIPKCEGAASTKAPWNASEF 337 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+l+get+rewlffdkprraf+sgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhl+eyein+ d +alyrlelklv XP_004505530.1 338 FDLSFLDGETVREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLFEYEINNHDGCALYRLELKLV 432 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d+kks+kgkv+k+sl+dlq+k+g+lta XP_004505530.1 433 DKKKSPKGKVTKESLTDLQNKMGKLTA 459 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence Send to blast
MMKENFNGKC GSSSHKSMKE KEKYLVDKIQ GIFSNIQLAR KESRANDIVI FEEQMHQLLR 60 EWQAELESPA TSLADGSLGS FTGDLAQLLQ AIEEKDDATS PLTKLVPLKN DLHQNNISDS 120 NYPFFQEKCF NNNQTLDHTF EGSASTLFNN PLNSSDMAQL HYHPFSLNQD MDHNTVGHNS 180 DLIGQFDFYH QDLSLGHNTE IKNSESAQFT FDEGFDCSQF LRDDDTAQFG ENHIPNILPS 240 IRPPPSAFRG PKCALWDCFR PAQGLEGCQD YCSSCHELLA NNEGLPGMTP ILRPYGIDVK 300 DGPLFAAVLA KTQGKEVGIP KCEGAASTKA PWNASEFFDL SFLDGETVRE WLFFDKPRRA 360 FDSGNRKQRS LPDYSGRGWH ESRKQVMKEH GGQKRSYYMD PQPLSYLEWH LFEYEINNHD 420 GCALYRLELK LVDKKKSPKG KVTKESLTDL QNKMGKLTAA FPSSDDGNPV KGKTDAKSED 480 IGPPEN

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence Send to blast

MMKENFNGKC GSSSHKSMKE KEKYLVDKIQ GIFSNIQLAR KESRANDIVI FEEQMHQLLR  60
EWQAELESPA TSLADGSLGS FTGDLAQLLQ AIEEKDDATS PLTKLVPLKN DLHQNNISDS  120
NYPFFQEKCF NNNQTLDHTF EGSASTLFNN PLNSSDMAQL HYHPFSLNQD MDHNTVGHNS  180
DLIGQFDFYH QDLSLGHNTE IKNSESAQFT FDEGFDCSQF LRDDDTAQFG ENHIPNILPS  240
IRPPPSAFRG PKCALWDCFR PAQGLEGCQD YCSSCHELLA NNEGLPGMTP ILRPYGIDVK  300
DGPLFAAVLA KTQGKEVGIP KCEGAASTKA PWNASEFFDL SFLDGETVRE WLFFDKPRRA  360
FDSGNRKQRS LPDYSGRGWH ESRKQVMKEH GGQKRSYYMD PQPLSYLEWH LFEYEINNHD  420
GCALYRLELK LVDKKKSPKG KVTKESLTDL QNKMGKLTAA FPSSDDGNPV KGKTDAKSED  480
IGPPEN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004505530.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004505530.1	0.0	transcription factor VOZ1
Refseq	XP_004505531.1	0.0	transcription factor VOZ1
Refseq	XP_012572680.1	0.0	transcription factor VOZ1
Refseq	XP_027191648.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-152	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3EA29	0.0	A0A1S3EA29_CICAR; transcription factor VOZ1
STRING	XP_004505529.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-148	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]