 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004504507.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
C2H2 |
| Protein Properties |
Length: 244aa MW: 28029.7 Da PI: 7.3064 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004504507.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.2 | 0.00026 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C k F ++ L H++ H
XP_004504507.1 80 FECQYCFKEFANSQALGGHQNAH 102
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MEKEMCDISH TWDGENGNSV EKRLRLFGFE LNPTKNNEGL VKESNNEGDE SVNSSNSISS 60
GGEKIVEEKT STRGQDERKF ECQYCFKEFA NSQALGGHQN AHKKERMKKK RLQLQARKAS 120
INYYLQPFQT NNHHGSFANY HGNDTHNWFY DPSSYNNSEF SLCEESQISF KSNVHDTTNS 180
FVDQKSSWYS LPSHNPPSQQ DNCMFTFSNK DDRPFIFKPS SNQIHTKGLD LQLGLNLKSS 240
TKRT
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT140104 | 1e-133 | BT140104.1 Medicago truncatula clone JCVI-FLMt-13L10 unknown mRNA. |
| GenBank | CT033763 | 1e-133 | CT033763.2 Medicago truncatula chromosome 5 clone mth2-139a2, COMPLETE SEQUENCE. |
| GenBank | CT033767 | 1e-133 | CT033767.2 Medicago truncatula chromosome 5 clone mth2-175p8, COMPLETE SEQUENCE. |
