PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504310.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 160aa    MW: 18270.3 Da    PI: 5.7736
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.4e-143694462
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                     k+ +r+q+NRe+ArrsR +K++ +e L + ++ L++eN +   ++   ++++ +++ e
  XP_004504310.1 36 QKKRKRMQSNRESARRSRMKKQQHMEDLNNQIEYLKKENNQISRNVGVTTQMYLNVEGE 94
                    6999*************************************999999999988877666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-163397IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-113481No hitNo description
PROSITE profilePS5021710.7833581IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-123789No hitNo description
PfamPF001709.5E-113787IPR004827Basic-leucine zipper domain
CDDcd147022.78E-193888No hitNo description
PROSITE patternPS0003604055IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MASPGGAYSS GTSSLQNSGS GSEGDIQQQQ VHVMDQKKRK RMQSNRESAR RSRMKKQQHM  60
EDLNNQIEYL KKENNQISRN VGVTTQMYLN VEGENAILRV QMAELSNRLQ SLNDIINYIE  120
SSNSLFQETD QLFNDCGFFD TWNSFPVNQP IMASADMLMY
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504310.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504309.21e-116bZIP transcription factor 44-like
SwissprotC0Z2L51e-44BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1S2YG521e-115A0A1S2YG52_CICAR; bZIP transcription factor 44-like
STRINGXP_004504310.11e-116(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-43basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]