PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504054.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family EIL
Protein Properties Length: 460aa    MW: 53275.1 Da    PI: 5.1323
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3391.41.2e-119233522353
                     XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                      lkkrmwkd++ll++lke+ k++  +++        +   e++rrkkmsraQD+iLkYM+k+m +c+a+GfvYgi+pekgkpv+g+s+sLr+WWk
  XP_004504054.1  23 QLKKRMWKDKILLQKLKEKGKKE--ENQ--------QAKDEASRRKKMSRAQDSILKYMMKIMTICKAKGFVYGIVPEKGKPVTGSSESLREWWK 107
                     69************999998862..222........23479****************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT- CS
            EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdq 190
                     e+v+f +n+paa+sky    l+ ++++ l+ ++ s+ h l +lqDTtlgSLLsalmqhc ppqrrfple+g++pPWWP+G+e+wwg++g l++++
  XP_004504054.1 108 EQVKFSQNAPAAVSKYL--PLLEENHELLELDPISYMHLLYDLQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPNGTEQWWGQQGlLAQEH 200
                     ****************4..47777777779***********************************************************999999 PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedve 285
                     g+ppykkphdlkkawkvsvL+a ikh+sp+++++r+l+ qsk lqdkm+ak+s+++++v+nqee++++            ++ +++s++++  ++
  XP_004504054.1 201 GPPPYKKPHDLKKAWKVSVLAAIIKHLSPNVDKVRKLVTQSKTLQDKMTAKDSATWCKVMNQEEALIQ----------LTNRCLKISEHDDGKNQ 285
                     9***************************************************************9883..........36778999999999*** PP

                     XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 286 gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                     g++ s+ ++++  ++  ++  ++krk++++ +     ++  +  q s++++se  ++f++k+s+ ++e
  XP_004504054.1 286 GESSSSSSSIHVLNELVECGSNEKRKSEFDLDVDFDFEK-LYSYQYSECPQSELCMGFTNKSSRVNHE 352
                     ******99999999999**********999999999887.5***********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-11123264No hitNo description
Gene3DG3DSA:1.10.3180.102.2E-66140268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-57142267IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MVKITEEIDP FDQEEEEEID YDQLKKRMWK DKILLQKLKE KGKKEENQQA KDEASRRKKM  60
SRAQDSILKY MMKIMTICKA KGFVYGIVPE KGKPVTGSSE SLREWWKEQV KFSQNAPAAV  120
SKYLPLLEEN HELLELDPIS YMHLLYDLQD TTLGSLLSAL MQHCVPPQRR FPLERGLAPP  180
WWPNGTEQWW GQQGLLAQEH GPPPYKKPHD LKKAWKVSVL AAIIKHLSPN VDKVRKLVTQ  240
SKTLQDKMTA KDSATWCKVM NQEEALIQLT NRCLKISEHD DGKNQGESSS SSSSIHVLNE  300
LVECGSNEKR KSEFDLDVDF DFEKLYSYQY SECPQSELCM GFTNKSSRVN HESLCAYRTE  360
QEHVPFQDYL SDDWMNMDIT GADNQKHDHS NIVGNVNELG EIVERTVEDY GGFWIHGMQQ  420
DLELHMGVDM KRDNVDLNQN PEQETTLSHE ETSIWDLTYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-591402681128Protein ETHYLENE INSENSITIVE 3
4zds_B2e-591402681128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504054.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504054.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-136EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1S2YFI00.0A0A1S2YFI0_CICAR; putative ETHYLENE INSENSITIVE 3-like 4 protein
STRINGXP_004504054.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-126EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]