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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004503785.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
BBR-BPC |
Protein Properties |
Length: 308aa MW: 34625.3 Da PI: 9.8162 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004503785.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 329.1 | 1.3e-100 | 1 | 308 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye...............paaslkenlglqlmssiaerdaki..rernlalsekkaavaerdmaflqrdkalaernkalv 75
m+dd ++e r+k yy+ ++++l +++++ s++aer+a+i e ++a+sek++a+a+rd a+ qrd+ala+r+ al+
XP_004503785.1 1 MNDDREYEngRHKMeYYRgahslwntdpqhqvkEQNALV--MNKKIRSIMAERQAAIleLELEAAISEKNEALAARDAALRQRDEALAQRDSALL 93
667766666899988999999999999766553224555..999*************77677889****************************** PP
GAGA_bind 76 erdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkk 170
erdn+l+al+ ++ns++ g+k ++++ + + +++++ a++ ++ + +a p++ ++ea +++ k +++ ++ +k +k+kk
XP_004503785.1 94 ERDNALAALQSRSNSVN------FPFNGGSKRMHHSSN-HLSDMTEAAYGSKDIIIRDASPVTVITSEAVKSHLAK--RSKGNKVSKPPTKVKKM 179
***********999843......334567777876666.5689*******999999*****999888888887777..44444455566789998 PP
GAGA_bind 171 sekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265
+e+ ++k +e+ ++ k+e++ +d++ln v++De+ +PvPvC+CtG++rqCYkWGnGGWqS+CCttt+S+yPLP+ +++r+aRi+grKmS+++f
XP_004503785.1 180 GEDLNRKAYSEG--TKIKSEWDRQDVGLNLVAFDETIMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVF 272
999999988888..57******************************************************************************* PP
GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
++lL++La+eG+d+s p+DLk++WA+HGtn+++ti+
XP_004503785.1 273 TRLLSRLASEGHDVSIPLDLKEYWARHGTNRYITIK 308
***********************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009723 | Biological Process | response to ethylene |
GO:0050793 | Biological Process | regulation of developmental process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MNDDREYENG RHKMEYYRGA HSLWNTDPQH QVKEQNALVM NKKIRSIMAE RQAAILELEL 60 EAAISEKNEA LAARDAALRQ RDEALAQRDS ALLERDNALA ALQSRSNSVN FPFNGGSKRM 120 HHSSNHLSDM TEAAYGSKDI IIRDASPVTV ITSEAVKSHL AKRSKGNKVS KPPTKVKKMG 180 EDLNRKAYSE GTKIKSEWDR QDVGLNLVAF DETIMPVPVC TCTGVPRQCY KWGNGGWQSS 240 CCTTTLSMYP LPQLPNKRHA RIGGRKMSGS VFTRLLSRLA SEGHDVSIPL DLKEYWARHG 300 TNRYITIK
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |