PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004502820.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 314aa    MW: 36430.4 Da    PI: 6.8561
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004502820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.11.1e-25123183259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dD ++WrKYGqKe+ +s+fprsYYrCt +   gC+++k+v+r +e+p++ +itY g H+++
  XP_004502820.1 123 DDIHSWRKYGQKEILNSQFPRSYYRCTRKhdqGCKATKQVQRIEENPDMYQITYIGFHTCK 183
                     8**************************988899**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.7E-25115183IPR003657WRKY domain
SuperFamilySSF1182903.92E-24120183IPR003657WRKY domain
SMARTSM007741.7E-36122184IPR003657WRKY domain
PfamPF031069.2E-25123183IPR003657WRKY domain
PROSITE profilePS5081119.416123185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MNVIFPAKRK LLVKELLQGK EYATQLKFLL KNPIASHGSP SVKELMTNVL RSFSHTXXXX  60
XLSVINSSQP SSSAVNYSGE DFRSEDSSES RKRLLPTTTK DRRGSYKRRK SEETRNIVSQ  120
TTDDIHSWRK YGQKEILNSQ FPRSYYRCTR KHDQGCKATK QVQRIEENPD MYQITYIGFH  180
TCKSTLQTPQ MVTFSDTNNN WDSFLVNFHH HSKVLNYDQH DDPLISTSQI RPNVKQEYLN  240
DERSELTEDL LDPNLWCDLK DFELSKPAIN LSFNTVVSDT VYSSTESQNL EIDFGVFSSD  300
FSNDLIYFDE SHLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-21116183269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190109RKRLLPTTTKDRRGSYKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004502820.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004502820.10.0probable WRKY transcription factor 70
TrEMBLA0A1S2YDY40.0A0A1S2YDY4_CICAR; probable WRKY transcription factor 70
STRINGXP_004502820.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-42WRKY DNA-binding protein 70