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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004502110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
CO-like |
Protein Properties |
Length: 412aa MW: 45535.4 Da PI: 4.8125 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004502110.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 19.2 | 2.6e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+C+ +++++ +C+++ +lC +C + H+ H++
XP_004502110.1 4 VCDFCGQQRSMVYCRSDAACLCLSCDRNVHSAntlarrHSR 44
6*****************************65667767765 PP
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2 | zf-B_box | 22.9 | 1.8e-07 | 46 | 88 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvp 41
C++++++++ C + + lC++C +H + H++++
XP_004502110.1 46 LLCERCSSQPALVRCSEEKISLCQNCDWLGHGNstsstHKRQT 88
57*****************************558999999876 PP
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3 | CCT | 61.8 | 2.2e-21 | 355 | 398 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R a++RYkeK+ktRkF+K++rY+sRK++A+ R RvKGrFvk+
XP_004502110.1 355 RSSAVMRYKEKKKTRKFDKRVRYASRKERADVRRRVKGRFVKAG 398
889**************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MGYVCDFCGQ QRSMVYCRSD AACLCLSCDR NVHSANTLAR RHSRTLLCER CSSQPALVRC 60 SEEKISLCQN CDWLGHGNST SSTHKRQTIN CYSGCPSSAE LSSIWSFVLD IPSLSETTCE 120 QELGFMSINE NRSAWVAPKN QNVSDSDQVT DLPDMDKSWA GTSSKPESSS EPRLLDHSPG 180 STKECVPKLY CSATKCPEER EDKDDLYGDF DMDEMDINIE NYDELFGMAL THSEELFENG 240 GFNSLFGAKE MSAGDSDCQD AIAAEGSSVG HFNATQPACS NAASADSILS TKTEPNLCIT 300 AKQAQSNLSF SGINEESGGA GDYQDCGASS MLLMGEPPWL NTCPENDLQL QSANRSSAVM 360 RYKEKKKTRK FDKRVRYASR KERADVRRRV KGRFVKAGDV YDYDPLSQTR SY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT143683 | 0.0 | BT143683.1 Medicago truncatula clone JCVI-FLMt-20N9 unknown mRNA. |