 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_004502034.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 246aa MW: 28622.1 Da PI: 4.8374 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004502034.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55 | 1.3e-17 | 63 | 110 | 9 | 56 |
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+q+++Le+ Fe ++++ e++ +LA++lgL+ rqV++WFqNrRa+ k
XP_004502034.1 63 FDQVKALEKSFELDNKLEPERKVKLAEELGLQPRQVSIWFQNRRARLK 110
58********************************************98 PP
|
| 2 | HD-ZIP_I/II | 122.8 | 1.6e-39 | 56 | 148 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl +qvk+LE+sFe ++kLeperKv+la+eLglqprqv +WFqnrRAR ktkqlE+dy +Lk+++d lk e ++L++e+e+L+++++e
XP_004502034.1 56 EKKRRLGFDQVKALEKSFELDNKLEPERKVKLAEELGLQPRQVSIWFQNRRARLKTKQLERDYGVLKSNFDVLKVEYSNLQQENEALTTKVRE 148
69**************************************************************************************99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MKRFNNSNTM ASLLSIYPSK GVDERNETKG YSEEFQAMLD RLEQEDSYED ASLMLEKKRR 60
LGFDQVKALE KSFELDNKLE PERKVKLAEE LGLQPRQVSI WFQNRRARLK TKQLERDYGV 120
LKSNFDVLKV EYSNLQQENE ALTTKVRELK AKLLRDESNE TEKEESPISS GVVKEEISNV 180
DDSSLCFNGS YVPSTTSSMI NLVHYYDSRG SPEKIFQNHF MRMEEQNFFS VSELCNFFSV 240
DQSPTL
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 112 | RRARLKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. Binds to the DNA sequence 5'-CAATNATTG-3'. {ECO:0000269|PubMed:12678559}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:12678559, ECO:0000269|PubMed:16055682}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CU024864 | 1e-126 | CU024864.5 M.truncatula DNA sequence from clone MTH2-9F11 on chromosome 3, complete sequence. |
