 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_004500442.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
Family |
LBD |
Protein Properties |
Length: 177aa MW: 19877.6 Da PI: 5.6634 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004500442.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 141.5 | 2.6e-44 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+Ca+Ck+lrr+Ca++C++apyfp+e+p+kfa+vhk+FGasnv+k+l++lp ++r++a++slvyeA+ar+rdPvyG+vg i+ lq+q+ ql+ +la
XP_004500442.1 6 PCASCKLLRRRCAQECIFAPYFPSEDPRKFAIVHKVFGASNVSKMLQELPIHQRSEAVNSLVYEANARVRDPVYGCVGAISYLQNQVTQLQMQLA 100
7********************************************************************************************** PP
DUF260 96 llkee 100
++++e
XP_004500442.1 101 VAQAE 105
*9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MGGSSPCASC KLLRRRCAQE CIFAPYFPSE DPRKFAIVHK VFGASNVSKM LQELPIHQRS 60 EAVNSLVYEA NARVRDPVYG CVGAISYLQN QVTQLQMQLA VAQAEILCIQ MQQDPVSVTS 120 SLPTYVDQDD KLMLLSENSN CYEPHLLPQY PNFPSSSSSS SNVFQDYEPL KRESFWT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | CU651581 | 1e-108 | CU651581.9 M.truncatula DNA sequence from clone MTH2-66L10 on chromosome 3, complete sequence. |