 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004500263.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
MYB |
| Protein Properties |
Length: 456aa MW: 52070.1 Da PI: 9.1276 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004500263.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 167 | 213 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W+ eEd +l+++vkq+G + W+ Ia+++ gR +kqc++rw+++l
XP_004500263.1 167 KGQWSDEEDRKLLKLVKQHGVRKWSQIAEKLE-GRAGKQCRERWHNHL 213
799*****************************.*************97 PP
|
| 2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 219 | 261 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+++W++eE+ +lv+ + + G++ W+ Ia++++ gRt++ +k++w+
XP_004500263.1 219 KDSWSEEEERILVESHGKIGNR-WAEIAKKIP-GRTENAIKNHWN 261
679*******************.*********.***********8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MTQEANFADH LMANEDVMNW SNQIPSLCVE KEDIINGLRK GGKGVGRRPK KITHHSSIGP 60
PLTAIDRFLW SQHNHFPQKK HQQNVDDGNF CSSGCSNAST YCFMWPNNVM TQEANFVDHL 120
MANEDMMNWT NQIPSLCVEK EDVNGLGKGG KGVGRRNKKV FTLSLIKGQW SDEEDRKLLK 180
LVKQHGVRKW SQIAEKLEGR AGKQCRERWH NHLRPDIKKD SWSEEEERIL VESHGKIGNR 240
WAEIAKKIPG RTENAIKNHW NATKRRQNSR RKNKRPQTTN GKPQSSILQD YIKTLSTQTN 300
NTTKSNFITP TNTTPSSSTS AISDEPSQNY QSNLVFENSS SPLIAESYDD ELLFMQQLFK 360
TNNSNQILTD HVNENGFVHS NYPNKTNSHN NSNNNNMYLS TSTSSNPMMM NYLNSDHYLS 420
PMMNNVELQL GSKNCSSNGK REMDLLDLVS STHFFY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 263 | 274 | KRRQNSRRKNKR |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CT033766 | 2e-51 | CT033766.2 Medicago truncatula chromosome 5 clone mth4-42c9, COMPLETE SEQUENCE. |
| GenBank | CT573510 | 2e-51 | CT573510.2 Medicago truncatula chromosome 5 clone mth4-41f7, COMPLETE SEQUENCE. |
