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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_004499875.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
MYB |
Protein Properties |
Length: 342aa MW: 39257.1 Da PI: 5.8289 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004499875.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.3 | 5.6e-16 | 32 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+lv++ G g+W+ Iar g+ R++k+c++rw +yl
XP_004499875.1 32 KGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYL 79
678*******************************************97 PP
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2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 85 | 129 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+++++E+el+++++ lG++ W+ Ia++++ gRt++++k++w++
XP_004499875.1 85 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 129
89********************.*********.***********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MQMRKPDLIT GINNKMNNNN NNNNISKNKL RKGLWSPEED EKLVRYMITK GQGCWSDIAR 60 NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEELIIHLH SILGNRWSQI AARLPGRTDN 120 EIKNFWNSTL KKRLKTNNNN TSQSPSDSSD QQIDVFDMKN NMIMPINEQD LMTLCMDNSS 180 SSTSSSSIQS MQMHAMVLSD QFDHPFSLLS NINNIPTCLT QDGNMVVDDI GLHSDDHYGI 240 LEANNKMGLL ENDFELPPLE SRISMEDKSM IPLINHNVMK SYNINHFNNS CFNNTNQIQN 300 SKVEDFFGFG NHGQGENLRM GEWDFEGLMQ DMSYFPTLDF QV
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