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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_004499467.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family |
TCP |
Protein Properties |
Length: 357aa MW: 40421.8 Da PI: 8.5014 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_004499467.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 101.2 | 1.8e-31 | 50 | 172 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec..eaess 78
g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak++i+el+ + + ++++s
XP_004499467.1 50 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKHEIDELPPLpnfpshgnfnfgfpsiN------IeaNTNTS 138
689*************************************************************75555555555333321......12344455 PP
TCP 79 sssasnsssg.................kaaksaakskksqksaa 105
+ +++ +++ ++k+ +
XP_004499467.1 139 QLNQQLLNINrnipwegstssqnsmwkL----------KPKEVT 172
5555533333445576543322222220..........222222 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0031347 | Biological Process | regulation of defense response |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
GO:0009507 | Cellular Component | chloroplast |
Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MIKNSKEALK QEGHSNSNND EKEKASSSNS LASQWSRLKD PRIVRVSRAF GGKDRHSKVC 60 TIRGLRDRRV RLSVPTAIQL YDLQDRLGLN QPSKVVDWLL NVAKHEIDEL PPLPNFPSHG 120 NFNFGFPSIN IEANTNTSQL NQQLLNINRN IPWEGSTSSQ NSMWKLKPKE VTQEMVIDNK 180 ANYWMNRIEE DDDNNNKHGS NEGNNSSDHV LSSNNNNLLL QRTNHQASFL GLLNTMPSMG 240 NYQWGGNSNV DVNSQLGNHI GFTNQTNVNV VTSLPPMLSL STGNSQMMPY FPSHHHVNAM 300 EMDNHHHQRQ INHHNYQMLS SSSQNPLNNS LNNPSFNLAM MIPKENPSNK DQDFTPK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT052494 | 1e-100 | BT052494.1 Medicago truncatula clone MTYFD_FE_FF_FG1G-J-6 unknown mRNA. |