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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_004499106.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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| Family |
G2-like |
| Protein Properties |
Length: 323aa MW: 36621.8 Da PI: 9.0958 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004499106.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.1 | 7.1e-32 | 155 | 208 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
XP_004499106.1 155 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 208
9****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MFTNNNNNNS HPIIMQRLFS PLLEPDLSLN ISPPSNISDS EAKEMETYKR VRTTSKPVYN 60
YNDISNSSTN SDSASSGSEL SHENVHNILH HHHHEPTLRL GFGNSCFNPQ YHHLHQQVQG 120
VSRNFNHHIQ PHIYGRDFKR SSRLVNGVKR SVRAPRMRWT TTLHAHFVHA VQLLGGHERA 180
TPKSVLELMN VKDLTLAHVK SHLQMYRTVK TTDKGTGHAQ TQGIFPLHGA NSSACERPNN 240
LPQPLQNSQR TSWQSSIETN TNNTEEKSEI GLTYSHLKGN DAMVDSTPLT RSNTMIDLEF 300
TLGRPNWEKD HAESSRELPL LKC
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-16 | 156 | 210 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates carpel integuments formation. Required for the specification of polarity in the ovule inner integument. Modulates the content of flavonols and proanthocyanidin in seeds. {ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:19054366, ECO:0000269|PubMed:20444210}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC157978 | 2e-56 | AC157978.25 Medicago truncatula clone mth2-47l16, complete sequence. |
| Publications
? help Back to Top |
- Lora J,Hormaza JI,Herrero M
Transition from two to one integument in Prunus species: expression pattern of INNER NO OUTER (INO), ABERRANT TESTA SHAPE (ATS) and ETTIN (ETT).
New Phytol., 2015. 208(2): p. 584-95
[PMID:25991552] - Skinner DJ,Brown RH,Kuzoff RK,Gasser CS
Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function.
BMC Plant Biol., 2016. 16(1): p. 143
[PMID:27350128] - Gomez MD,Ventimilla D,Sacristan R,Perez-Amador MA
Gibberellins Regulate Ovule Integument Development by Interfering with the Transcription Factor ATS.
Plant Physiol., 2016. 172(4): p. 2403-2415
[PMID:27794102]
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