PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498682.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 332aa    MW: 37207.9 Da    PI: 8.9854
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.5e-104581339
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                    + k  rr+++NReAAr+sR+RKka++++Le    +++
  XP_004498682.1 45 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKFT 81
                    568899************************8544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-83989No hitNo description
SMARTSM003382.4E-743106IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0364589IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.23E-74789No hitNo description
PfamPF001703.8E-74785IPR004827Basic-leucine zipper domain
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141446.1E-31129204IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAEGSPITDI STDGDTDDKN QRFDRSRSLA AMASDSGDRS KNKSDQKTLR RLAQNREAAR  60
KSRLRKKAYV QQLESSRLKF TQLEQELQRA RQQGIFISSS GDQAHSMSGN GAMAFDVEYA  120
RWLEEQNRQI NELRGAVNSH ASETELHMIM DGILAHYDEI FRLKGIAAKA DVFHLLSGMW  180
KTPAERCFLW LGGFRSSELL KLLINQLEPL TDQQLVGITN LQQSSQEAED ALSQGMEALQ  240
QSLSETLTTG PLGSSSSSGN VANYMGQMAM AMGKLGTLEG FIRQADNLRQ QTLQQIHRIL  300
TTRQSARALL AIHDYFSRLR ALSSLWLARP RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498682.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498677.10.0transcription factor TGA2.2 isoform X2
RefseqXP_012570693.10.0transcription factor TGA2.2 isoform X2
RefseqXP_027189523.10.0transcription factor TGA2.2 isoform X3
RefseqXP_027189524.10.0transcription factor TGA2.2 isoform X5
RefseqXP_027189525.10.0transcription factor TGA2.2 isoform X6
RefseqXP_027189526.10.0transcription factor TGA2.2 isoform X7
RefseqXP_027189527.10.0transcription factor TGA2.2 isoform X7
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1S2Y3E30.0A0A1S2Y3E3_CICAR; transcription factor TGA2.2 isoform X7
TrEMBLA0A1S3E5J40.0A0A1S3E5J4_CICAR; transcription factor TGA2.2 isoform X2
TrEMBLA0A3Q7X7920.0A0A3Q7X792_CICAR; transcription factor TGA2.2 isoform X5
TrEMBLA0A3Q7XQ840.0A0A3Q7XQ84_CICAR; transcription factor TGA2.2 isoform X3
TrEMBLA0A3Q7YEW30.0A0A3Q7YEW3_CICAR; transcription factor TGA2.2 isoform X6
STRINGXP_004498676.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-150TGACG motif-binding factor 6