PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498019.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family FAR1
Protein Properties Length: 217aa    MW: 25322.8 Da    PI: 6.7827
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.14.9e-07911621890
            FAR1  18 kskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +++ + r+++ tk  + C ++gk ++ k+   +  r++ + +++C  +l+ ++++  ++w+++ +   HnHela
  XP_004498019.1  91 SETATARSRTKTKLILGCERSGKYRHWKNP--NLTRSTWTRKCECPFRLRGTRSSvGDEWYLHVICGLHNHELA 162
                     333446777789999**********99988..78888999999******9999999****************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF581137.32E-5952No hitNo description
PfamPF087315.5E-565161IPR014842Transcription factor AFT
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MDQGGDNSDK MYEGLEPDFE EMYDDLDPYF EEMYDDVKPN FDAMNDRVEP VMIDLIDVFT  60
TGMMFDTRDE LLKWARNVGR ENGIVVVIFR SETATARSRT KTKLILGCER SGKYRHWKNP  120
NLTRSTWTRK CECPFRLRGT RSSVGDEWYL HVICGLHNHE LAKKLTGHSF LCRLSQNEKN  180
VLGDMTKNLV KPKNILMTLR DHNVESLTTI KQVYNAR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498019.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498019.11e-163uncharacterized protein LOC101509075
TrEMBLA0A1S2Y3171e-162A0A1S2Y317_CICAR; uncharacterized protein LOC101509075
STRINGXP_004498019.11e-163(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1801122