 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_004497769.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
LBD |
| Protein Properties |
Length: 281aa MW: 31492.2 Da PI: 6.3903 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004497769.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 119.3 | 2.1e-37 | 11 | 109 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
aCa+Ck++rrkC+kdC+lapyfpa++pk+f n+h+l+G+s ++kllk+++++++++am+s++ye+++r P+yG++gvi+ lq +l++++ el+
XP_004497769.1 11 ACASCKFQRRKCSKDCPLAPYFPANKPKTFSNAHRLYGVSSISKLLKRINNDKKDEAMTSIIYESNIRSMFPIYGCTGVINILQGKLHNARLELN 105
7*********************************************************************************************9 PP
DUF260 96 llke 99
++++
XP_004497769.1 106 YIQN 109
9886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MDINKRSSNK ACASCKFQRR KCSKDCPLAP YFPANKPKTF SNAHRLYGVS SISKLLKRIN 60
NDKKDEAMTS IIYESNIRSM FPIYGCTGVI NILQGKLHNA RLELNYIQNL LNICKQNYAS 120
QQQNLLPMGN NFISMPSTSC QIPNDPICNN IGDRSYFYDN SENNNFMLSH IIPNDVNNIT 180
SIDSKNELEV NVETGVSGVF SNGADIQLME ENSNLMATQG DLEHNYFGVD VQSAYDDYDT 240
ELSRLFHGEQ HPPITPKDAP KSSSVGSGEQ ELDKNSKHGD K
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 3e-26 | 8 | 105 | 8 | 105 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 3e-26 | 8 | 105 | 8 | 105 | LOB family transfactor Ramosa2.1 |
