PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004497701.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family FAR1
Protein Properties Length: 680aa    MW: 80011.7 Da    PI: 9.4609
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004497701.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.94.5e-25292191
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                    +fYneY+k++GF +r+++ +ksk++g  t+r+f+C keg r  +k+  +   ++raetrtgCka++++++++  gk++v +++ +HnH+l+p
  XP_004497701.2  2 EFYNEYSKRIGFGIRREYANKSKKDGILTSRRFTCFKEGIRCVDKRG-HPVGEHRAETRTGCKARMVISLDRkIGKYKVVDFVAQHNHPLQP 92
                    6******************************************9999.99999*****************9989***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.9E-21292IPR004330FAR1 DNA binding domain
PROSITE profilePS508119.113891IPR003657WRKY domain
PfamPF105511.3E-29212306IPR018289MULE transposase domain
PROSITE profilePS509669.446478525IPR007527Zinc finger, SWIM-type
SMARTSM005754.5E-4500527IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    Send to blast
YEFYNEYSKR IGFGIRREYA NKSKKDGILT SRRFTCFKEG IRCVDKRGHP VGEHRAETRT  60
GCKARMVISL DRKIGKYKVV DFVAQHNHPL QPPEYVHMIR SHRHISEVQA SQIILADESG  120
LRPKDFHEYM SKQVGGIETV GFTRQDLKNY LRTKRKQSLK YGDVDALLMY FKQESENPSF  180
FYEFQMDVDE QITNIFWADA QMINDYGYFG DVITFDTTYK KNKDYRPLGV FVGLNNHRQT  240
IIFGVALLYD ETIPSFQWLF ETFLKAMGGE KPKTILTDQD AAMAKAISLV VPETFHGLCT  300
WHIRQNALKH VNHLYQKSSQ FCLEFEACID LHEEEAEFLN AWNSLLVEHN VSKDSWLHMI  360
FQLKEKWAWA YVRKTFIAGM RSTQLSESFN ADLKNHLKSD LNLVQFFTHF KRVVNGKRNN  420
ESEADFESRH KLPRLKMKKA RMLVQAGNVY TPKIFEEFQE EYEEYQDTCI KDLKEGLYVV  480
TNYDNTKERI VMGNPMDQKV ACDCRKFETH GILCNHALKV LDAMNIKLIP QHYILKRWTR  540
DARLGSNQDW KVKHVELDIK AHFMKRYNEL CPRMIKLTNR ASESHESYVF LSKVYEESNK  600
IIDDMLAKIY VNEESSRMIH VSISIANDEI DNNLDTLGCA KGIKKRDCSH QNKKRPKSWV  660
EKLARKRNRY SQKKKNRKKI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004497701.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497701.20.0protein FAR1-RELATED SEQUENCE 5-like, partial
TrEMBLA0A1S2Y1700.0A0A1S2Y170_CICAR; protein FAR1-RELATED SEQUENCE 5-like
STRINGXP_004497701.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4030530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-118FAR1-related sequence 5